Intro
Recent Publications
Refereed Journals
Presentations & posters
Software
Stata
Perl scripts for genetic analysis
LAURF
IBDSCORE
Background
Chris Wallace

Intro

I am a genetic statistician working on the MRC Bright Study at QMUL. My interest lies in the development and application of statistical methods in the search for genes underlying human complex disease, with a particular focus on hypertension. I am funded by the British Heart Foundation.

Recent Publications

Refereed Journals

see more...

Presentations & posters

see more...

Software

Stata

To see stata adofiles available at this site, please do (from within stata):

net from http://www.qmul.ac.uk/~hhw159/stata

Perl scripts for genetic analysis

Small perl utilities, mainly for manipulation of pedfiles, but also LD display and format conversion.

LAURF

Software for Linkage Analysis Accounting for Uncertainty in Recombination Fractions (LAURF) is available. This relates to my talk at the EMGM 2005 (see above for link to abstract). I would appreciate feedback; suggestions for improvements from users who try it. I have tested it, but it should still be currently treated as BETA SOFTWARE, with all the caveats that implies. [download]1

IBDSCORE

Implements a score test for the Rice-Holmans IBD regression model. The model is described by

and this score test by

[download]1


1. please note this is a gzipped tarball. Please check the extension after download is ".tgz" (I understand Internet Explorer sometimes messes this up). It should then extract with gnu tar using

tar zxvf [file].tgz

Background

MRC Bright Project, Clinical Pharmacology, John Vane Science Centre, Queen Mary & Westfield College
Charterhouse Square, London EC1M 6BQ
c dot wallace at qmul dot ac dot uk