I am a genetic statistician working on the MRC Bright Study at QMUL. My interest lies in the development and application of statistical methods in the search for genes underlying human complex disease, with a particular focus on hypertension. I am funded by the British Heart Foundation.
To see stata adofiles available at this site, please do (from within stata):
net from http://www.qmul.ac.uk/~hhw159/stata
Small perl utilities, mainly for manipulation of pedfiles, but also LD display and format conversion.
Software for Linkage Analysis Accounting for Uncertainty in Recombination Fractions (LAURF) is available. This relates to my talk at the EMGM 2005 (see above for link to abstract). I would appreciate feedback; suggestions for improvements from users who try it. I have tested it, but it should still be currently treated as BETA SOFTWARE, with all the caveats that implies. [download]1
Implements a score test for the Rice-Holmans IBD regression model. The model is described by
and this score test by
1. please note this is a gzipped tarball. Please check the extension after download is ".tgz" (I understand Internet Explorer sometimes messes this up). It should then extract with gnu tar using
tar zxvf [file].tgz